Skip to main content
Back to top
Ctrl
+
K
Installation
Tutorials
Mouse Hypothalamus MERFISH 3D Reconstruction
Human Breast Cancer IMC 3D Reconstruction
Mouse Brain Deep STARmap 3D Validation
API Reference
Core
deepspatial.core.DeepSpatial
deepspatial.core.DeepSpatial.setup_data
deepspatial.core.DeepSpatial.build_model
deepspatial.core.DeepSpatial.fit
deepspatial.core.DeepSpatial.load_checkpoint
deepspatial.core.DeepSpatial.reconstruct_full_volume
deepspatial.core.DeepSpatial.reconstruct_between_slices
Module
deepspatial.module.DeepSpatialModule
deepspatial.module.DeepSpatialModule.training_step
deepspatial.module.DeepSpatialModule.sample
Models
deepspatial.models.git.GiT
deepspatial.models.git.GiTBlock
deepspatial.models.git.PatchEmbedder
Visualization Utilities
deepspatial.vis_utils.plot_3d_labels
deepspatial.vis_utils.plot_virtual_slice
deepspatial.vis_utils.plot_orthogonal_projections
deepspatial.vis_utils.plot_z_distribution
deepspatial.vis_utils.interactive_3d_labels
deepspatial.vis_utils.interactive_3d_expression
deepspatial.vis_utils.interactive_spatial_range_widget
Data Utilities
deepspatial.data_utils.DeepSpatialDataset
deepspatial.data_utils.compute_uot_coupling
deepspatial.data_utils.compute_cost_matrix
Citation
Homepage
GitHub
Search
Error
Please activate JavaScript to enable the search functionality.
Ctrl
+
K
